Burkholderia cenocepacia J2315, BCAL0259 (rpsD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Burkholderia cenocepacia J2315
GCF_000009485.1|latest
Locus Tag
BCAL0259
NCBI Locus TagQU43_RS37830
Name
rpsD
Replicon chromosome 1
Genomic location 287113 - 287736 (+ strand)

Cross-References

RefSeq WP_006477177.1
GI 206558666
Entrez 6934110
GI 206558666
INSDC CAR50570.1
NCBI Locus Tag QU43_RS37830
NCBI Old Locus Tag BCAL0259
RefSeq WP_006477177.1,GeneID
UniParc UPI000052E58B
UniProtKB Acc B4E5E5
UniProtKB ID RS4_BURCJ
UniRef100 UniRef100_Q1BRX3
UniRef50 UniRef50_P44373
UniRef90 UniRef90_A4JAR5

Product

Feature Type CDS
Coding Frame 1
Product Name
30S ribosomal protein S4
Synonyms
Evidence for Translation
Charge (pH 7) 16.44
Kyte-Doolittle Hydrophobicity Value -0.626
Molecular Weight (kDa) 23185.4
Isoelectric Point (pI) 10.77

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 596 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG000282 (655 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BCAL0259
Search term: rpsD

Human Homologs

References

No references are associated with this feature.