Burkholderia cenocepacia J2315, BCAL0223 (rplA)

Gene Feature Overview

Strain	Burkholderia cenocepacia J2315 GCF_000009485.1|latest
Locus Tag	BCAL0223
NCBI Locus Tag	QU43_RS37650
Name	rplA
Replicon	chromosome 1
Genomic location	256924 - 257622 (+ strand)

Cross-References

RefSeq	WP_006482906.1
GI	206558630
Entrez	6934032
GI	206558630
INSDC	CAR50534.1
NCBI Locus Tag	QU43_RS37650
NCBI Old Locus Tag	BCAL0223
RefSeq	WP_006482906.1,GeneID
UniParc	UPI000033F05C
UniProtKB Acc	B4E5A9
UniProtKB ID	RL1_BURCJ
UniRef100	UniRef100_B4E5A9
UniRef50	UniRef50_Q9RSS8
UniRef90	UniRef90_B2JIH7

Product

Feature Type	CDS
Coding Frame	1
Product Name	50S ribosomal protein L1
Synonyms
Evidence for Translation
Charge (pH 7)	9.20
Kyte-Doolittle Hydrophobicity Value	0.037
Molecular Weight (kDa)	24353.0
Isoelectric Point (pI)	10.42

Subcellular localization

Individual Mappings	Localization Confidence PMID Unknown Class 3 20472543 Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 664 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group	BG000247 (655 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: BCAL0223 Search term: rplA Search term: 50S ribosomal protein L1

Human Homologs

References