Burkholderia cenocepacia J2315, BCAL0036 (atpD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Burkholderia cenocepacia J2315
GCF_000009485.1|latest
Locus Tag
BCAL0036
NCBI Locus TagQU43_RS36670
Name
atpD
Replicon chromosome 1
Genomic location 38673 - 40067 (+ strand)

Cross-References

RefSeq WP_006482710.1
GI 206558440
Entrez 6933329
GI 206558440
INSDC CAR50342.1
NCBI Locus Tag QU43_RS36670
NCBI Old Locus Tag BCAL0036
RefSeq WP_006482710.1,GeneID
UniParc UPI00017B90F4
UniProtKB Acc B4EEY9
UniProtKB ID ATPB_BURCJ
UniRef100 UniRef100_B4EEY9
UniRef50 UniRef50_P50002
UniRef90 UniRef90_Q13SQ2

Product

Feature Type CDS
Coding Frame 1
Product Name
F0F1 ATP synthase subunit beta
Synonyms
Evidence for Translation
Charge (pH 7) -11.17
Kyte-Doolittle Hydrophobicity Value -0.110
Molecular Weight (kDa) 50568.5
Isoelectric Point (pI) 5.05

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
4Q4L HYDROLASE 04/14/14 Crystal structure of an ATP synthase subunit beta 1 (F1-B1) from Burkholderia thailandensis BURKHOLDERIA THAILANDENSIS 2.2 X-RAY DIFFRACTION 97.8

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 666 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG000092 (655 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BCAL0036
Search term: atpD

Human Homologs

Ensembl 97, assembly GRCh38.p12
ATP synthase F1 subunit beta [Source:HGNC Symbol;Acc:HGNC:830]
E-value: 3.8e-180
Percent Identity: 69.1

References

No references are associated with this feature.