Burkholderia glumae BGR1, bglu_2g08650

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0045333 cellular respiration
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01582
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0015944 formate oxidation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01582
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0051539 4 iron, 4 sulfur cluster binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01582
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016021 integral component of membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01582
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG bgl00680 Methane metabolism 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bgl01200 Carbon metabolism 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bgl01120 Microbial metabolism in diverse environments 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bgl00630 Glyoxylate and dicarboxylate metabolism 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bgl01100 Metabolic pathways 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Coils Coil 282 302 -
MobiDBLite mobidb-lite consensus disorder prediction 287 304 -
ProSiteProfiles PS51379 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain 91 123 7.374
ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site 133 144 -
MobiDBLite mobidb-lite consensus disorder prediction 1 22 -
SUPERFAMILY SSF54862 29 270 2.83E-71
CDD cd10558 FDH-N IPR006470 Formate dehydrogenase iron-sulphur subunit, Proteobacteria 30 238 9.23315E-148
Pfam PF13247 4Fe-4S dicluster domain IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain 92 188 2.6E-24
MobiDBLite mobidb-lite consensus disorder prediction 284 304 -
ProSiteProfiles PS51379 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain 158 189 6.139
Gene3D G3DSA:3.30.70.20 17 162 6.1E-97
PIRSF PIRSF036298 IPR014603 Formate dehydrogenase iron-sulphur subunit 1 304 7.8E-154
Gene3D G3DSA:3.30.70.20 27 227 6.1E-97
MobiDBLite mobidb-lite consensus disorder prediction 8 22 -
Gene3D G3DSA:1.20.5.480 IPR038384 Formate dehydrogenase, C-terminal domain superfamily 248 294 1.2E-14
ProSiteProfiles PS51379 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain 124 153 10.146
Pfam PF09163 Formate dehydrogenase N, transmembrane IPR015246 Formate dehydrogenase, transmembrane 246 288 9.7E-22
ProSiteProfiles PS51379 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain 29 57 7.735
TIGRFAM TIGR01582 FDH-beta: formate dehydrogenase, beta subunit IPR006470 Formate dehydrogenase iron-sulphur subunit, Proteobacteria 7 289 2.4E-140

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.