Burkholderia glumae BGR1, bglu_1g04420

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00834
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006098 pentose-phosphate shunt
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF001461
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0005975 carbohydrate metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00834
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.20.20.70
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004750 ribulose-phosphate 3-epimerase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF001461
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG bgl00030 Pentose phosphate pathway 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG (InterPro) 00040 Pentose and glucuronate interconversions InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG (InterPro) 00030 Pentose phosphate pathway InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG bgl01200 Carbon metabolism 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bgl00710 Carbon fixation in photosynthetic organisms 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bgl01130 Biosynthesis of antibiotics 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG (InterPro) 00710 Carbon fixation in photosynthetic organisms InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc formaldehyde assimilation II (assimilatory RuMP Cycle) InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG bgl01100 Metabolic pathways 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
MetaCyc Rubisco shunt InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG bgl01110 Biosynthesis of secondary metabolites 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bgl01120 Microbial metabolism in diverse environments 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bgl01230 Biosynthesis of amino acids 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bgl00040 Pentose and glucuronate interconversions 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. IPR000056 Ribulose-phosphate 3-epimerase-like 33 47 -
Coils Coil 150 170 -
SUPERFAMILY SSF51366 IPR011060 Ribulose-phosphate binding barrel 4 220 1.28E-73
CDD cd00429 RPE IPR000056 Ribulose-phosphate 3-epimerase-like 6 219 9.65687E-124
PIRSF PIRSF001461 IPR026019 Ribulose-phosphate 3-epimerase 1 228 1.6E-105
Pfam PF00834 Ribulose-phosphate 3 epimerase family IPR000056 Ribulose-phosphate 3-epimerase-like 6 206 1.8E-90
ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. IPR000056 Ribulose-phosphate 3-epimerase-like 135 157 -
Gene3D G3DSA:3.20.20.70 IPR013785 Aldolase-type TIM barrel 1 225 5.7E-82
TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase IPR000056 Ribulose-phosphate 3-epimerase-like 6 219 2.0E-96

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.