Burkholderia glumae BGR1, bglu_1g04340

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0004844 uracil DNA N-glycosylase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00148
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS00130
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006281 DNA repair
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00148
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006284 base-excision repair
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00148
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG bgl03410 Base excision repair 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SMART SM00987 98 262 5.7E-36
Gene3D G3DSA:3.40.470.10 IPR036895 Uracil-DNA glycosylase-like domain superfamily 49 280 4.5E-88
SUPERFAMILY SSF52141 IPR036895 Uracil-DNA glycosylase-like domain superfamily 54 274 6.17E-81
Pfam PF03167 Uracil DNA glycosylase superfamily IPR005122 Uracil-DNA glycosylase-like 101 261 1.1E-21
SMART SM00986 IPR005122 Uracil-DNA glycosylase-like 98 262 5.7E-36
Hamap MF_00148 Uracil-DNA glycosylase [ung]. IPR002043 Uracil-DNA glycosylase family 1 55 273 37.596
ProSitePatterns PS00130 Uracil-DNA glycosylase signature. IPR018085 Uracil-DNA glycosylase, active site 106 115 -
CDD cd10027 UDG_F1 IPR002043 Uracil-DNA glycosylase family 1 69 272 3.61312E-122
TIGRFAM TIGR00628 ung: uracil-DNA glycosylase IPR002043 Uracil-DNA glycosylase family 1 57 266 2.4E-74

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.