Burkholderia cenocepacia J2315, BCAS0367 (citA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS00217
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0022857 transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS00217
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016021 integral component of membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS00217
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005887 integral component of plasma membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF07690
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF103473 IPR036259 MFS transporter superfamily 22 427 1.7E-62
ProSiteProfiles PS50850 Major facilitator superfamily (MFS) profile. IPR020846 Major facilitator superfamily domain 21 431 36.75
CDD cd17368 MFS_CitA 22 428 7.62198E-173
Pfam PF07690 Major Facilitator Superfamily IPR011701 Major facilitator superfamily 28 381 1.9E-27
Gene3D G3DSA:1.20.1250.20 19 431 4.6E-58
ProSitePatterns PS00216 Sugar transport proteins signature 1. IPR005829 Sugar transporter, conserved site 299 316 -
ProSitePatterns PS00216 Sugar transport proteins signature 1. IPR005829 Sugar transporter, conserved site 81 97 -
TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein IPR004736 MFS transporter, metabolite:H symporter 28 418 1.3E-133
ProSitePatterns PS00217 Sugar transport proteins signature 2. IPR005829 Sugar transporter, conserved site 131 156 -

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.