Burkholderia cenocepacia J2315, BCAS0361

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00126
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003700 DNA binding transcription factor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00126
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.40.190.10 97 188 1.2E-15
Pfam PF03466 LysR substrate binding domain IPR005119 LysR, substrate-binding 101 300 1.1E-19
ProSiteProfiles PS50931 LysR-type HTH domain profile. IPR000847 Transcription regulator HTH, LysR 12 69 24.228
SUPERFAMILY SSF53850 96 301 5.07E-41
SUPERFAMILY SSF46785 IPR011991 Winged helix-turn-helix DNA-binding domain 10 90 2.79E-18
Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IPR000847 Transcription regulator HTH, LysR 14 72 1.5E-14
Gene3D G3DSA:1.10.10.10 IPR011991 Winged helix-turn-helix DNA-binding domain 10 92 3.1E-13
Gene3D G3DSA:3.40.190.10 189 274 1.4E-13
CDD cd08459 PBP2_DntR_NahR_LinR_like 104 302 2.39696E-86

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.