Burkholderia cenocepacia J2315, BCAM2057 (bcscV)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0030254 protein secretion by the type III secretion system
IGC
Inferred from Genomic Context
ECO:0000177
genomic context evidence
Biological Process GO:0015031 protein transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01399
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00771
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016021 integral component of membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01399
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009306 protein secretion
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00771
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG bcj03070 Bacterial secretion system 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.40.30.60 IPR042194 FHIPEP, domain 1 379 513 1.3E-14
Coils Coil 734 735 -
Coils Coil 179 206 -
MobiDBLite mobidb-lite consensus disorder prediction 716 735 -
ProSitePatterns PS00994 Bacterial export FHIPEP family signature. IPR025505 FHIPEP conserved site 155 178 -
PRINTS PR00949 Type III secretion system inner membrane A protein family signature IPR001712 Type III secretion system FHIPEP 199 216 1.6E-51
PRINTS PR00949 Type III secretion system inner membrane A protein family signature IPR001712 Type III secretion system FHIPEP 250 264 1.6E-51
Pfam PF00771 FHIPEP family IPR001712 Type III secretion system FHIPEP 44 706 1.4E-209
PRINTS PR00949 Type III secretion system inner membrane A protein family signature IPR001712 Type III secretion system FHIPEP 169 187 1.6E-51
PIRSF PIRSF005419 IPR001712 Type III secretion system FHIPEP 22 719 2.6E-217
PRINTS PR00949 Type III secretion system inner membrane A protein family signature IPR001712 Type III secretion system FHIPEP 51 64 1.6E-51
Gene3D G3DSA:1.10.8.540 IPR042193 FHIPEP, domain 3 514 602 1.3E-26
Gene3D G3DSA:1.10.490.80 IPR042196 FHIPEP, domain 4 605 713 1.0E-14
TIGRFAM TIGR01399 hrcV: type III secretion protein, HrcV family IPR006302 Type III secretion protein HrcV 32 711 2.6E-220
PRINTS PR00949 Type III secretion system inner membrane A protein family signature IPR001712 Type III secretion system FHIPEP 150 166 1.6E-51
PRINTS PR00949 Type III secretion system inner membrane A protein family signature IPR001712 Type III secretion system FHIPEP 88 107 1.6E-51

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.