Burkholderia cenocepacia J2315, BCAM2057 (bcscV)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0030254	protein secretion by the type III secretion system	IGC Inferred from Genomic Context	ECO:0000177 genomic context evidence
Biological Process	GO:0015031	protein transport	ISM Inferred from Sequence Model Term mapped from: InterPro:TIGR01399	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0009306	protein secretion	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00771	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Cellular Component	GO:0016020	membrane	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00771	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Cellular Component	GO:0016021	integral component of membrane	ISM Inferred from Sequence Model Term mapped from: InterPro:TIGR01399	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	bcj03070	Bacterial secretion system	73.0+/03-31, Mar 15	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Gene3D	G3DSA:1.10.490.80		IPR042196	FHIPEP, domain 4	605	713	1.0E-14
PIRSF	PIRSF005419		IPR001712	Type III secretion system FHIPEP	22	719	2.6E-217
Pfam	PF00771	FHIPEP family	IPR001712	Type III secretion system FHIPEP	44	706	1.4E-209
PRINTS	PR00949	Type III secretion system inner membrane A protein family signature	IPR001712	Type III secretion system FHIPEP	199	216	1.6E-51
PRINTS	PR00949	Type III secretion system inner membrane A protein family signature	IPR001712	Type III secretion system FHIPEP	150	166	1.6E-51
MobiDBLite	mobidb-lite	consensus disorder prediction			716	735	-
ProSitePatterns	PS00994	Bacterial export FHIPEP family signature.	IPR025505	FHIPEP conserved site	155	178	-
Gene3D	G3DSA:1.10.8.540		IPR042193	FHIPEP, domain 3	514	602	1.3E-26
PRINTS	PR00949	Type III secretion system inner membrane A protein family signature	IPR001712	Type III secretion system FHIPEP	88	107	1.6E-51
Coils	Coil				734	735	-
Gene3D	G3DSA:3.40.30.60		IPR042194	FHIPEP, domain 1	379	513	1.3E-14
TIGRFAM	TIGR01399	hrcV: type III secretion protein, HrcV family	IPR006302	Type III secretion protein HrcV	32	711	2.6E-220
PRINTS	PR00949	Type III secretion system inner membrane A protein family signature	IPR001712	Type III secretion system FHIPEP	250	264	1.6E-51
Coils	Coil				179	206	-
PRINTS	PR00949	Type III secretion system inner membrane A protein family signature	IPR001712	Type III secretion system FHIPEP	169	187	1.6E-51
PRINTS	PR00949	Type III secretion system inner membrane A protein family signature	IPR001712	Type III secretion system FHIPEP	51	64	1.6E-51

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.