Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Biological Process | GO:0030254 | protein secretion by the type III secretion system | Inferred from Genomic Context | ECO:0000177 genomic context evidence |
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Biological Process | GO:0009306 | protein secretion |
Inferred from Sequence Model
Term mapped from: InterPro:PF00263
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ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Database | Xref | Pathway | Version | Evidence | PMID |
---|---|---|---|---|---|
KEGG | bcj03070 | Bacterial secretion system | 73.0+/03-31, Mar 15 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
PRINTS | PR01337 | Type III secretion system outer membrane G protein family signature | IPR003522 | Type III secretion system outer membrane pore YscC/HrcC | 446 | 465 | 1.4E-30 |
Gene3D | G3DSA:3.55.50.30 | 37 | 121 | 1.9E-26 | |||
PRINTS | PR01337 | Type III secretion system outer membrane G protein family signature | IPR003522 | Type III secretion system outer membrane pore YscC/HrcC | 579 | 598 | 1.4E-30 |
TIGRFAM | TIGR02516 | type_III_yscC: type III secretion outer membrane pore, YscC/HrcC family | IPR003522 | Type III secretion system outer membrane pore YscC/HrcC | 296 | 601 | 9.1E-85 |
PRINTS | PR01337 | Type III secretion system outer membrane G protein family signature | IPR003522 | Type III secretion system outer membrane pore YscC/HrcC | 341 | 361 | 1.4E-30 |
Pfam | PF03958 | Bacterial type II/III secretion system short domain | IPR005644 | NolW-like | 196 | 338 | 5.2E-20 |
Gene3D | G3DSA:3.30.1370.120 | IPR038591 | NolW-like superfamily | 122 | 190 | 2.1E-6 | |
Pfam | PF00263 | Bacterial type II and III secretion system protein | IPR004846 | Type II/III secretion system | 433 | 600 | 5.8E-42 |
ProSitePatterns | PS00875 | Bacterial type II secretion system protein D signature. | IPR004845 | Type II secretion system GspD, conserved site | 546 | 579 | - |
PRINTS | PR01337 | Type III secretion system outer membrane G protein family signature | IPR003522 | Type III secretion system outer membrane pore YscC/HrcC | 207 | 224 | 1.4E-30 |
PRINTS | PR01337 | Type III secretion system outer membrane G protein family signature | IPR003522 | Type III secretion system outer membrane pore YscC/HrcC | 480 | 495 | 1.4E-30 |