Burkholderia cenocepacia J2315, BCAM2055 (bcscC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0030254 protein secretion by the type III secretion system
IGC
Inferred from Genomic Context
ECO:0000177
genomic context evidence
Biological Process GO:0009306 protein secretion
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00263
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG bcj03070 Bacterial secretion system 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR01337 Type III secretion system outer membrane G protein family signature IPR003522 Type III secretion system outer membrane pore YscC/HrcC 446 465 1.4E-30
Gene3D G3DSA:3.55.50.30 37 121 1.9E-26
PRINTS PR01337 Type III secretion system outer membrane G protein family signature IPR003522 Type III secretion system outer membrane pore YscC/HrcC 579 598 1.4E-30
TIGRFAM TIGR02516 type_III_yscC: type III secretion outer membrane pore, YscC/HrcC family IPR003522 Type III secretion system outer membrane pore YscC/HrcC 296 601 9.1E-85
PRINTS PR01337 Type III secretion system outer membrane G protein family signature IPR003522 Type III secretion system outer membrane pore YscC/HrcC 341 361 1.4E-30
Pfam PF03958 Bacterial type II/III secretion system short domain IPR005644 NolW-like 196 338 5.2E-20
Gene3D G3DSA:3.30.1370.120 IPR038591 NolW-like superfamily 122 190 2.1E-6
Pfam PF00263 Bacterial type II and III secretion system protein IPR004846 Type II/III secretion system 433 600 5.8E-42
ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. IPR004845 Type II secretion system GspD, conserved site 546 579 -
PRINTS PR01337 Type III secretion system outer membrane G protein family signature IPR003522 Type III secretion system outer membrane pore YscC/HrcC 207 224 1.4E-30
PRINTS PR01337 Type III secretion system outer membrane G protein family signature IPR003522 Type III secretion system outer membrane pore YscC/HrcC 480 495 1.4E-30

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.