Burkholderia cenocepacia J2315, BCAM1945

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02321
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01845
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0015562 efflux transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02321
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0022857 transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01845
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF02321 Outer membrane efflux protein IPR003423 Outer membrane efflux protein 78 269 7.9E-28
Gene3D G3DSA:1.20.1600.10 69 490 3.2E-126
Pfam PF02321 Outer membrane efflux protein IPR003423 Outer membrane efflux protein 309 486 5.1E-24
ProSiteProfiles PS51257 Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 5.0
Gene3D G3DSA:2.20.200.10 115 378 3.2E-126
SUPERFAMILY SSF56954 4 491 4.84E-97
Coils Coil 198 225 -
MobiDBLite mobidb-lite consensus disorder prediction 37 62 -
TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family IPR010131 RND efflux system, outer membrane lipoprotein, NodT 11 489 7.3E-99

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.