Burkholderia cenocepacia J2315, BCAM1032

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF47413
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF13560 Helix-turn-helix domain 3 64 4.5E-13
SUPERFAMILY SSF47413 IPR010982 Lambda repressor-like, DNA-binding domain superfamily 1 61 2.7E-12
ProSiteProfiles PS50943 Cro/C1-type HTH domain profile. IPR001387 Cro/C1-type helix-turn-helix domain 7 62 11.755
CDD cd00093 HTH_XRE IPR001387 Cro/C1-type helix-turn-helix domain 4 60 2.30101E-9
Gene3D G3DSA:1.10.260.40 1 68 5.4E-13
SMART SM00530 IPR001387 Cro/C1-type helix-turn-helix domain 6 62 8.3E-7

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.