Burkholderia cenocepacia J2315, BCAM0700
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0003677 | DNA binding |
Inferred from Sequence Model
Term mapped from: InterPro:PS50977
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| ProSitePatterns | PS01081 | TetR-type HTH domain signature. | IPR023772 | DNA-binding HTH domain, TetR-type, conserved site | 42 | 73 | - |
| Pfam | PF00440 | Bacterial regulatory proteins, tetR family | IPR001647 | DNA-binding HTH domain, TetR-type | 30 | 73 | 1.3E-8 |
| SUPERFAMILY | SSF46689 | IPR009057 | Homeobox-like domain superfamily | 20 | 95 | 2.21E-14 | |
| ProSiteProfiles | PS50977 | TetR-type HTH domain profile. | IPR001647 | DNA-binding HTH domain, TetR-type | 24 | 84 | 15.504 |
| Gene3D | G3DSA:1.10.357.10 | 15 | 210 | 9.6E-24 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.