Burkholderia cenocepacia J2315, BCAM0583

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0043565 sequence-specific DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF12833
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF12833
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF46689
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003700 DNA-binding transcription factor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF12833
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
ProSiteProfiles PS01124 Bacterial regulatory proteins, araC family DNA-binding domain profile. IPR018060 DNA binding HTH domain, AraC-type 244 342 25.365
Pfam PF12833 Helix-turn-helix domain IPR018060 DNA binding HTH domain, AraC-type 263 341 6.7E-20
Pfam PF12852 Cupin IPR032783 AraC-type transcription regulator, ligand-binding domain 29 225 2.3E-32
ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. IPR018062 HTH domain AraC-type, conserved site 294 336 -
SUPERFAMILY SSF46689 IPR009057 Homeobox-like domain superfamily 293 342 1.54E-10
SUPERFAMILY SSF46689 IPR009057 Homeobox-like domain superfamily 241 291 5.97E-9
SMART SM00342 IPR018060 DNA binding HTH domain, AraC-type 257 340 6.0E-29
SUPERFAMILY SSF51182 IPR011051 RmlC-like cupin domain superfamily 43 118 3.66E-8
Gene3D G3DSA:1.10.10.60 236 344 9.8E-25

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.