Burkholderia cenocepacia J2315, BCAM0443 (copR)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00383
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00383
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00383
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG bcj02020 Two-component system 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd00156 REC IPR001789 Signal transduction response regulator, receiver domain 4 115 3.46715E-36
SUPERFAMILY SSF52172 IPR011006 CheY-like superfamily 1 171 2.42E-40
ProSiteProfiles PS51755 OmpR/PhoB-type DNA-binding domain profile. IPR001867 OmpR/PhoB-type DNA-binding domain 123 221 38.989
ProSiteProfiles PS50110 Response regulatory domain profile. IPR001789 Signal transduction response regulator, receiver domain 2 115 44.685
Coils Coil 133 153 -
SMART SM00448 IPR001789 Signal transduction response regulator, receiver domain 1 111 2.5E-42
Gene3D G3DSA:3.40.50.2300 1 119 2.2E-39
SMART SM00862 IPR001867 OmpR/PhoB-type DNA-binding domain 144 219 2.1E-22
TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator IPR006291 Transcriptional regulatory protein PcoR, heavy metal response 3 219 1.0E-97
Pfam PF00486 Transcriptional regulatory protein, C terminal IPR001867 OmpR/PhoB-type DNA-binding domain 146 219 3.6E-24
Gene3D G3DSA:1.10.10.10 IPR036388 Winged helix-like DNA-binding domain superfamily 120 222 4.6E-29
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 3 111 9.3E-28
CDD cd00383 trans_reg_C IPR001867 OmpR/PhoB-type DNA-binding domain 131 219 5.48317E-31

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.