Burkholderia cenocepacia J2315, BCAM0342

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0006355	regulation of transcription, DNA-templated	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00126	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0003700	DNA-binding transcription factor activity	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00126	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
ProSiteProfiles	PS50931	LysR-type HTH domain profile.	IPR000847	Transcription regulator HTH, LysR	1	60	26.409
PRINTS	PR00039	LysR bacterial regulatory protein HTH signature	IPR000847	Transcription regulator HTH, LysR	20	31	3.6E-7
Pfam	PF03466	LysR substrate binding domain	IPR005119	LysR, substrate-binding	92	294	1.2E-42
Pfam	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family	IPR000847	Transcription regulator HTH, LysR	8	63	2.7E-18
SUPERFAMILY	SSF46785		IPR036390	Winged helix DNA-binding domain superfamily	4	84	3.7E-21
Gene3D	G3DSA:3.40.190.10				165	265	5.7E-61
PRINTS	PR00039	LysR bacterial regulatory protein HTH signature	IPR000847	Transcription regulator HTH, LysR	31	41	3.6E-7
CDD	cd08475	PBP2_CrgA_like_6			93	290	1.94395E-100
Gene3D	G3DSA:3.40.190.10				92	291	5.7E-61
Gene3D	G3DSA:1.10.10.10		IPR036388	Winged helix-like DNA-binding domain superfamily	1	86	1.2E-25
SUPERFAMILY	SSF53850				90	296	1.34E-47
PRINTS	PR00039	LysR bacterial regulatory protein HTH signature	IPR000847	Transcription regulator HTH, LysR	41	52	3.6E-7

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.