Burkholderia cenocepacia J2315, BCAM0322

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00862
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00862
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00862
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd00383 trans_reg_C IPR001867 OmpR/PhoB-type DNA-binding domain 132 215 2.13126E-29
SMART SM00448 IPR001789 Signal transduction response regulator, receiver domain 1 112 1.3E-37
ProSiteProfiles PS51755 OmpR/PhoB-type DNA-binding domain profile. IPR001867 OmpR/PhoB-type DNA-binding domain 124 218 34.821
SMART SM00862 IPR001867 OmpR/PhoB-type DNA-binding domain 145 216 1.2E-23
ProSiteProfiles PS50110 Response regulatory domain profile. IPR001789 Signal transduction response regulator, receiver domain 2 116 38.995
SUPERFAMILY SSF52172 IPR011006 CheY-like superfamily 1 125 5.69E-37
SUPERFAMILY SSF46894 IPR016032 Signal transduction response regulator, C-terminal effector 118 216 1.02E-25
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 3 111 1.1E-25
CDD cd00156 REC IPR001789 Signal transduction response regulator, receiver domain 4 115 4.57719E-36
Pfam PF00486 Transcriptional regulatory protein, C terminal IPR001867 OmpR/PhoB-type DNA-binding domain 146 215 3.1E-20
Gene3D G3DSA:3.40.50.2300 1 121 1.8E-38
Gene3D G3DSA:1.10.10.10 IPR036388 Winged helix-like DNA-binding domain superfamily 123 220 2.8E-27

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.