Burkholderia cenocepacia J2315, BCAM0240 (cciR)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0009372 quorum sensing
IMP
Inferred from Mutant Phenotype
ECO:0000315
mutant phenotype evidence used in manual assertion
16041013 Reviewed by curator
Biological Process GO:2000147 positive regulation of cell motility
IMP
Inferred from Mutant Phenotype
ECO:0000315
mutant phenotype evidence used in manual assertion
16041013 Reviewed by curator
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd06170
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF46894
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.30.450.80 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily 32 194 2.9E-35
PRINTS PR00038 LuxR bacterial regulatory protein HTH signature IPR000792 Transcription regulator LuxR, C-terminal 214 230 2.8E-6
ProSiteProfiles PS50043 LuxR-type HTH domain profile. IPR000792 Transcription regulator LuxR, C-terminal 193 258 24.966
Pfam PF03472 Autoinducer binding domain IPR005143 Transcription factor LuxR-like, autoinducer-binding domain 42 184 5.5E-25
CDD cd06170 LuxR_C_like IPR000792 Transcription regulator LuxR, C-terminal 200 255 1.59661E-16
SMART SM00421 IPR000792 Transcription regulator LuxR, C-terminal 197 254 2.7E-19
Gene3D G3DSA:1.10.10.10 IPR036388 Winged helix-like DNA-binding domain superfamily 195 261 2.8E-23
SUPERFAMILY SSF75516 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily 27 191 7.19E-32
Pfam PF00196 Bacterial regulatory proteins, luxR family IPR000792 Transcription regulator LuxR, C-terminal 200 254 1.7E-16
PRINTS PR00038 LuxR bacterial regulatory protein HTH signature IPR000792 Transcription regulator LuxR, C-terminal 200 214 2.8E-6
PRINTS PR00038 LuxR bacterial regulatory protein HTH signature IPR000792 Transcription regulator LuxR, C-terminal 230 242 2.8E-6
SUPERFAMILY SSF46894 IPR016032 Signal transduction response regulator, C-terminal effector 190 260 1.22E-17

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.