Burkholderia cenocepacia J2315, BCAL3527 (gspD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0015628 protein secretion by the type II secretion system
ISS
Inferred from Sequence or Structural Similarity 		ECO:0000044
sequence similarity evidence
Cellular Component GO:0015627 type II protein secretion system complex
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02517
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0019867 outer membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02517
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009306 protein secretion
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00263
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0015628 protein secretion by the type II secretion system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02517
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG bcj03070 Bacterial secretion system 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
MobiDBLite mobidb-lite consensus disorder prediction 755 777 -
Pfam PF00263 Bacterial type II and III secretion system protein IPR004846 Type II/III secretion system 508 669 2.3E-50
MobiDBLite mobidb-lite consensus disorder prediction 734 777 -
PRINTS PR00811 Bacterial general secretion pathway protein D signature IPR001775 GspD/PilQ family 657 671 1.8E-29
PRINTS PR00811 Bacterial general secretion pathway protein D signature IPR001775 GspD/PilQ family 634 652 1.8E-29
MobiDBLite mobidb-lite consensus disorder prediction 331 352 -
Gene3D G3DSA:3.30.1370.120 IPR038591 NolW-like superfamily 23 187 2.3E-60
PRINTS PR00811 Bacterial general secretion pathway protein D signature IPR001775 GspD/PilQ family 410 420 1.8E-29
PRINTS PR00811 Bacterial general secretion pathway protein D signature IPR001775 GspD/PilQ family 499 523 1.8E-29
Pfam PF03958 Bacterial type II/III secretion system short domain IPR005644 NolW-like 268 410 6.5E-20
TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D IPR013356 Type II secretion system GspD 32 679 1.7E-206
PRINTS PR00811 Bacterial general secretion pathway protein D signature IPR001775 GspD/PilQ family 534 544 1.8E-29
Pfam PF03958 Bacterial type II/III secretion system short domain IPR005644 NolW-like 129 187 1.5E-11
Gene3D G3DSA:3.30.1370.120 IPR038591 NolW-like superfamily 189 263 8.2E-13
Pfam PF03958 Bacterial type II/III secretion system short domain IPR005644 NolW-like 192 263 2.0E-11

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.