Burkholderia cenocepacia J2315, BCAL3525 (gspF)

Gene Feature Overview

Strain	Burkholderia cenocepacia J2315 GCF_000009485.1|latest
Locus Tag	BCAL3525
NCBI Locus Tag	QU43_RS54360
Name	gspF
Replicon	chromosome 1
Genomic location	3859731 - 3860948 (- strand)

Cross-References

RefSeq	WP_006491634.1
GI	206561861
Entrez	6933675
GI	206561861
INSDC	CAR53848.1
NCBI Locus Tag	QU43_RS54360
NCBI Old Locus Tag	BCAL3525
RefSeq	WP_006491634.1,GeneID
UniParc	UPI00017B9A06
UniProtKB Acc	B4E799
UniProtKB ID	B4E799_BURCJ
UniRef100	UniRef100_B4E799
UniRef50	UniRef50_D5CMQ1
UniRef90	UniRef90_Q2T2F5

Product

Feature Type	CDS
Coding Frame	1
Product Name	type II secretion system protein F
Synonyms
Evidence for Translation
Charge (pH 7)	11.21
Kyte-Doolittle Hydrophobicity Value	0.404
Molecular Weight (kDa)	43988.2
Isoelectric Point (pI)	10.66

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 405 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group	BG000047 (650 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: BCAL3525 Search term: gspF Search term: type II secretion system protein F

Human Homologs

References

Molecular characterization of genetic loci required for secretion of exoproducts in Burkholderia pseudomallei. DeShazer D, Brett PJ, Burtnick MN, Woods DE J Bacteriol 1999 Aug;181(15):4661-4 PubMed ID: 10419967