Burkholderia cenocepacia J2315, BCAL3522 (gspH)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0015628 protein secretion by the type II secretion system
IGC
Inferred from Genomic Context
ECO:0000177
genomic context evidence
Biological Process GO:0015628 protein secretion by the type II secretion system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01708
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0015627 type II protein secretion system complex
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01708
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG bcj03070 Bacterial secretion system 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF07963 Prokaryotic N-terminal methylation motif IPR012902 Prokaryotic N-terminal methylation site 7 32 1.2E-8
Pfam PF12019 Type II transport protein GspH IPR022346 General secretion pathway, GspH 47 152 2.6E-7
TIGRFAM TIGR01708 typeII_sec_gspH: type II secretion system protein H IPR002416 Type II secretion system protein H 8 154 1.2E-27
ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. IPR012902 Prokaryotic N-terminal methylation site 11 31 -
Gene3D G3DSA:3.55.40.10 41 108 3.3E-8
SUPERFAMILY SSF54523 13 107 5.81E-12
TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain IPR012902 Prokaryotic N-terminal methylation site 11 32 5.6E-8

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.