Burkholderia cenocepacia J2315, BCAL3112 (waaC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0009244 lipopolysaccharide core region biosynthetic process
IMP
Inferred from Mutant Phenotype 		ECO:0000315
mutant phenotype evidence used in manual assertion		 19525227 Reviewed by curator
Biological Process GO:0009244 lipopolysaccharide core region biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02193
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016757 transferase activity, transferring glycosyl groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01075
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008920 lipopolysaccharide heptosyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02193
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG bcj01100 Metabolic pathways 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bcj00540 Lipopolysaccharide biosynthesis 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd03789 GT9_LPS_heptosyltransferase 3 307 1.80137E-46
TIGRFAM TIGR02193 heptsyl_trn_I: lipopolysaccharide heptosyltransferase I IPR011908 Lipopolysaccharide heptosyltransferase I 3 326 1.5E-124
Gene3D G3DSA:3.40.50.2000 180 325 6.2E-37
Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) IPR002201 Glycosyl transferase, family 9 76 313 1.7E-52
Gene3D G3DSA:3.40.50.2000 2 164 3.3E-55
SUPERFAMILY SSF53756 2 320 1.99E-73

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.