Burkholderia cenocepacia J2315, BCAL2950 (rpsA)

Gene Feature Overview

Strain	Burkholderia cenocepacia J2315 GCF_000009485.1|latest
Locus Tag	BCAL2950
NCBI Locus Tag	QU43_RS51395
Name	rpsA
Replicon	chromosome 1
Genomic location	3227772 - 3229484 (- strand)

Cross-References

RefSeq	WP_012492864.1
GI	206561285
Entrez	6933748
GI	206561285
INSDC	CAR53252.1
NCBI Locus Tag	QU43_RS51395
NCBI Old Locus Tag	BCAL2950
RefSeq	WP_012492864.1,GeneID
UniParc	UPI00017B9736
UniProtKB Acc	B4EB40
UniProtKB ID	B4EB40_BURCJ
UniRef100	UniRef100_B4EB40
UniRef50	UniRef50_P0AG69
UniRef90	UniRef90_B4EB40

Product

Feature Type	CDS
Coding Frame	1
Product Name	30S ribosomal protein S1
Synonyms
Evidence for Translation
Charge (pH 7)	-15.77
Kyte-Doolittle Hydrophobicity Value	-0.294
Molecular Weight (kDa)	62267.0
Isoelectric Point (pI)	4.82

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 603 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group	BG000889 (653 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: BCAL2950 Search term: rpsA Search term: 30S ribosomal protein S1

Human Homologs

References