Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Molecular Function | GO:0003676 | nucleic acid binding |
Inferred from Sequence Model
Term mapped from: InterPro:PS50126
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0006412 | translation |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00717
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Cellular Component | GO:0005840 | ribosome |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00717
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0003735 | structural constituent of ribosome |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00717
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0003723 | RNA binding |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00717
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Database | Xref | Pathway | Version | Evidence | PMID |
---|---|---|---|---|---|
KEGG | bcj03010 | Ribosome | 73.0+/03-31, Mar 15 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
SUPERFAMILY | SSF50249 | IPR012340 | Nucleic acid-binding, OB-fold | 355 | 449 | 5.82E-22 | |
SMART | SM00316 | IPR022967 | RNA-binding domain, S1 | 371 | 443 | 2.2E-21 | |
Pfam | PF00575 | S1 RNA binding domain | IPR003029 | S1 domain | 285 | 356 | 1.9E-21 |
SUPERFAMILY | SSF50249 | IPR012340 | Nucleic acid-binding, OB-fold | 13 | 122 | 2.54E-17 | |
CDD | cd05689 | S1_RPS1_repeat_ec4 | 283 | 354 | 3.36526E-41 | ||
PRINTS | PR00681 | Ribosomal protein S1 signature | 164 | 184 | 1.2E-80 | ||
Gene3D | G3DSA:2.40.50.140 | 366 | 453 | 2.6E-24 | |||
PRINTS | PR00681 | Ribosomal protein S1 signature | 135 | 152 | 1.2E-80 | ||
PRINTS | PR00681 | Ribosomal protein S1 signature | 93 | 112 | 1.2E-80 | ||
PRINTS | PR00681 | Ribosomal protein S1 signature | 339 | 357 | 1.2E-80 | ||
TIGRFAM | TIGR00717 | rpsA: ribosomal protein bS1 | IPR000110 | Ribosomal protein S1 | 12 | 529 | 1.4E-206 |
SMART | SM00316 | IPR022967 | RNA-binding domain, S1 | 284 | 356 | 7.2E-25 | |
PRINTS | PR00681 | Ribosomal protein S1 signature | 117 | 133 | 1.2E-80 | ||
ProSiteProfiles | PS50126 | S1 domain profile. | IPR003029 | S1 domain | 460 | 529 | 21.484 |
ProSiteProfiles | PS50126 | S1 domain profile. | IPR003029 | S1 domain | 373 | 443 | 20.021 |
SMART | SM00316 | IPR022967 | RNA-binding domain, S1 | 199 | 269 | 1.9E-29 | |
ProSiteProfiles | PS50126 | S1 domain profile. | IPR003029 | S1 domain | 114 | 180 | 15.094 |
Pfam | PF00575 | S1 RNA binding domain | IPR003029 | S1 domain | 28 | 94 | 1.0E-5 |
Gene3D | G3DSA:2.40.50.140 | 107 | 190 | 1.8E-8 | |||
CDD | cd05687 | S1_RPS1_repeat_ec1_hs1 | 30 | 96 | 1.36933E-14 | ||
PRINTS | PR00681 | Ribosomal protein S1 signature | 48 | 62 | 1.2E-80 | ||
SUPERFAMILY | SSF50249 | IPR012340 | Nucleic acid-binding, OB-fold | 442 | 540 | 3.73E-20 | |
SUPERFAMILY | SSF50249 | IPR012340 | Nucleic acid-binding, OB-fold | 113 | 193 | 8.92E-15 | |
ProSiteProfiles | PS50126 | S1 domain profile. | IPR003029 | S1 domain | 201 | 269 | 23.328 |
SUPERFAMILY | SSF50249 | IPR012340 | Nucleic acid-binding, OB-fold | 264 | 363 | 1.64E-26 | |
Gene3D | G3DSA:2.40.50.140 | 196 | 277 | 1.6E-28 | |||
ProSiteProfiles | PS50126 | S1 domain profile. | IPR003029 | S1 domain | 30 | 96 | 10.279 |
Gene3D | G3DSA:2.40.50.140 | 278 | 365 | 3.4E-29 | |||
SMART | SM00316 | IPR022967 | RNA-binding domain, S1 | 458 | 529 | 1.8E-19 | |
CDD | cd05691 | S1_RPS1_repeat_ec6 | 460 | 532 | 1.46382E-28 | ||
Gene3D | G3DSA:2.40.50.140 | 454 | 536 | 6.4E-21 | |||
SMART | SM00316 | IPR022967 | RNA-binding domain, S1 | 112 | 180 | 4.4E-9 | |
Gene3D | G3DSA:2.40.50.140 | 15 | 106 | 1.2E-13 | |||
CDD | cd04465 | S1_RPS1_repeat_ec2_hs2 | 114 | 180 | 7.25934E-29 | ||
CDD | cd05688 | S1_RPS1_repeat_ec3 | 200 | 267 | 4.04687E-36 | ||
Coils | Coil | 569 | 570 | - | |||
Pfam | PF00575 | S1 RNA binding domain | IPR003029 | S1 domain | 459 | 529 | 1.5E-14 |
Pfam | PF00575 | S1 RNA binding domain | IPR003029 | S1 domain | 198 | 269 | 7.4E-23 |
PIRSF | PIRSF002111 | IPR000110 | Ribosomal protein S1 | 1 | 543 | 1.8E-217 | |
SMART | SM00316 | IPR022967 | RNA-binding domain, S1 | 28 | 96 | 0.093 | |
Pfam | PF00575 | S1 RNA binding domain | IPR003029 | S1 domain | 370 | 443 | 2.5E-18 |
SUPERFAMILY | SSF50249 | IPR012340 | Nucleic acid-binding, OB-fold | 198 | 285 | 1.0E-26 | |
ProSiteProfiles | PS50126 | S1 domain profile. | IPR003029 | S1 domain | 286 | 356 | 21.799 |
PRINTS | PR00681 | Ribosomal protein S1 signature | 299 | 318 | 1.2E-80 | ||
PRINTS | PR00681 | Ribosomal protein S1 signature | 221 | 242 | 1.2E-80 | ||
PRINTS | PR00681 | Ribosomal protein S1 signature | 30 | 48 | 1.2E-80 | ||
Pfam | PF00575 | S1 RNA binding domain | IPR003029 | S1 domain | 114 | 180 | 9.7E-12 |