Burkholderia cenocepacia J2315, BCAL2949 (ihfB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00381
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005694 chromosome
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00381
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006310 DNA recombination
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00381
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00381
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR01727 Prokaryotic integration host factor signature IPR000119 Histone-like DNA-binding protein 75 89 5.9E-17
Pfam PF00216 Bacterial DNA-binding protein IPR000119 Histone-like DNA-binding protein 1 90 3.2E-28
SUPERFAMILY SSF47729 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily 1 92 5.45E-30
Hamap MF_00381 Integration host factor subunit beta [ihfB]. IPR005685 Integration host factor, beta subunit 1 94 28.621
SMART SM00411 IPR000119 Histone-like DNA-binding protein 1 91 6.6E-39
PRINTS PR01727 Prokaryotic integration host factor signature IPR000119 Histone-like DNA-binding protein 59 72 5.9E-17
MobiDBLite mobidb-lite consensus disorder prediction 76 107 -
MobiDBLite mobidb-lite consensus disorder prediction 76 101 -
Gene3D G3DSA:4.10.520.10 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily 1 93 6.5E-32
PRINTS PR01727 Prokaryotic integration host factor signature IPR000119 Histone-like DNA-binding protein 41 56 5.9E-17
CDD cd13836 IHF_B 1 89 1.0931E-48
TIGRFAM TIGR00988 hip: integration host factor, beta subunit IPR005685 Integration host factor, beta subunit 1 92 3.2E-39

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.