Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Biological Process | GO:0009244 | lipopolysaccharide core region biosynthetic process | Inferred from Sequence or Structural Similarity | ECO:0000044 sequence similarity evidence |
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Biological Process | GO:0008653 | lipopolysaccharide metabolic process |
Inferred from Sequence Model
Term mapped from: InterPro:MF_00994
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ECO:0000259 match to InterPro signature evidence used in automatic assertion |
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Molecular Function | GO:0005515 | protein binding |
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:1.25.40.10
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
SUPERFAMILY | SSF81901 | 40 | 247 | 2.2E-14 | |||
Gene3D | G3DSA:1.25.40.10 | IPR011990 | Tetratricopeptide-like helical domain superfamily | 176 | 357 | 6.9E-9 | |
SMART | SM00028 | IPR019734 | Tetratricopeptide repeat | 70 | 103 | 75.0 | |
SMART | SM00028 | IPR019734 | Tetratricopeptide repeat | 36 | 69 | 32.0 | |
Gene3D | G3DSA:1.25.40.10 | IPR011990 | Tetratricopeptide-like helical domain superfamily | 19 | 172 | 4.4E-14 | |
Pfam | PF18073 | Rubredoxin metal binding domain | IPR041166 | LapB, rubredoxin metal binding domain | 354 | 381 | 9.3E-9 |
Pfam | PF13432 | Tetratricopeptide repeat | 49 | 90 | 8.8E-5 | ||
Pfam | PF13432 | Tetratricopeptide repeat | 185 | 237 | 8.6E-6 | ||
Hamap | MF_00994 | Lipopolysaccharide assembly protein B [lapB]. | IPR030865 | Lipopolysaccharide assembly protein B | 6 | 386 | 35.198 |
ProSiteProfiles | PS50293 | TPR repeat region circular profile. | IPR013026 | Tetratricopeptide repeat-containing domain | 180 | 247 | 9.362 |
SMART | SM00028 | IPR019734 | Tetratricopeptide repeat | 180 | 213 | 17.0 | |
ProSiteProfiles | PS50293 | TPR repeat region circular profile. | IPR013026 | Tetratricopeptide repeat-containing domain | 36 | 141 | 11.383 |
SMART | SM00028 | IPR019734 | Tetratricopeptide repeat | 214 | 247 | 44.0 |