Burkholderia cenocepacia J2315, BCAL2943

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0009244 lipopolysaccharide core region biosynthetic process
IGC
Inferred from Genomic Context
ECO:0000177
genomic context evidence
Biological Process GO:0006281 DNA repair
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00278
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00278
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SMART SM00278 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 61 80 680.0
Pfam PF12836 Helix-hairpin-helix motif 21 78 5.5E-14
Gene3D G3DSA:1.10.150.280 14 89 4.5E-16
MobiDBLite mobidb-lite consensus disorder prediction 93 115 -
SUPERFAMILY SSF47781 IPR010994 RuvA domain 2-like 20 88 1.67E-19
SMART SM00278 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 30 49 0.089

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.