Burkholderia cenocepacia J2315, BCAL2942 (cysM)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0009244 | lipopolysaccharide core region biosynthetic process | Inferred from Mutant Phenotype | ECO:0000315 mutant phenotype evidence used in manual assertion |
||
| Biological Process | GO:0006535 | cysteine biosynthetic process from serine |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01136
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Molecular Function | GO:0004124 | cysteine synthase activity |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01136
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| MetaCyc | seleno-amino acid biosynthesis (plants) | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
||
| KEGG (InterPro) | 00920 | Sulfur metabolism | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
|
| KEGG (InterPro) | 00270 | Cysteine and methionine metabolism | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
|
| KEGG | bcj01230 | Biosynthesis of amino acids | 73.0+/03-31, Mar 15 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | bcj01120 | Microbial metabolism in diverse environments | 73.0+/03-31, Mar 15 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | bcj00920 | Sulfur metabolism | 73.0+/03-31, Mar 15 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | bcj01200 | Carbon metabolism | 73.0+/03-31, Mar 15 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | bcj00270 | Cysteine and methionine metabolism | 73.0+/03-31, Mar 15 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | bcj01130 | Biosynthesis of antibiotics | 73.0+/03-31, Mar 15 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | bcj01100 | Metabolic pathways | 73.0+/03-31, Mar 15 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Gene3D | G3DSA:3.40.50.1100 | 41 | 146 | 5.8E-106 | |||
| CDD | cd01561 | CBS_like | 11 | 294 | 1.27326E-134 | ||
| SUPERFAMILY | SSF53686 | IPR036052 | Tryptophan synthase beta subunit-like PLP-dependent enzyme | 2 | 298 | 1.96E-88 | |
| Pfam | PF00291 | Pyridoxal-phosphate dependent enzyme | IPR001926 | Pyridoxal-phosphate dependent enzyme | 7 | 287 | 1.6E-61 |
| ProSitePatterns | PS00901 | Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. | IPR001216 | Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site | 36 | 54 | - |
| Gene3D | G3DSA:3.40.50.1100 | 9 | 294 | 5.8E-106 | |||
| TIGRFAM | TIGR01138 | cysM: cysteine synthase B | IPR005858 | Cysteine synthase CysM | 5 | 298 | 1.5E-134 |
| TIGRFAM | TIGR01136 | cysKM: cysteine synthase | IPR005856 | Cysteine synthase | 6 | 298 | 1.7E-117 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.