Burkholderia cenocepacia J2315, BCAL1675
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0071236 | cellular response to antibiotic | Inferred from Genetic Interaction | ECO:0000011 genetic interaction evidence |
19761586 | Reviewed by curator |
| Biological Process | GO:0042908 | xenobiotic transport |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00915
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Molecular Function | GO:0015562 | efflux transmembrane transporter activity |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00915
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Biological Process | GO:0055085 | transmembrane transport |
Inferred from Sequence Model
Term mapped from: InterPro:PR00702
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Cellular Component | GO:0016020 | membrane |
Inferred from Sequence Model
Term mapped from: InterPro:PR00702
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Cellular Component | GO:0016021 | integral component of membrane |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00915
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Molecular Function | GO:0022857 | transmembrane transporter activity |
Inferred from Sequence Model
Term mapped from: InterPro:PR00702
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG | bcj02020 | Two-component system | 73.0+/03-31, Mar 15 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | bcj01501 | beta-Lactam resistance | 73.0+/03-31, Mar 15 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Gene3D | G3DSA:3.30.70.1430 | 566 | 665 | 0.0 | |||
| SUPERFAMILY | SSF82866 | 295 | 496 | 7.59E-50 | |||
| SUPERFAMILY | SSF82693 | 564 | 667 | 2.62E-24 | |||
| Gene3D | G3DSA:3.30.70.1440 | 666 | 862 | 0.0 | |||
| PRINTS | PR00702 | Acriflavin resistance protein family signature | IPR001036 | Acriflavin resistance protein | 390 | 414 | 9.4E-104 |
| TIGRFAM | TIGR00915 | 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family | IPR004764 | Hydrophobe/amphiphile efflux-1 HAE1 | 1 | 1028 | 0.0 |
| Gene3D | G3DSA:3.30.2090.10 | IPR027463 | Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains | 718 | 806 | 0.0 | |
| PRINTS | PR00702 | Acriflavin resistance protein family signature | IPR001036 | Acriflavin resistance protein | 362 | 383 | 9.4E-104 |
| SUPERFAMILY | SSF82693 | 135 | 329 | 2.88E-24 | |||
| SUPERFAMILY | SSF82693 | 38 | 130 | 8.63E-24 | |||
| SUPERFAMILY | SSF82866 | 803 | 1025 | 1.83E-40 | |||
| PRINTS | PR00702 | Acriflavin resistance protein family signature | IPR001036 | Acriflavin resistance protein | 469 | 492 | 9.4E-104 |
| PRINTS | PR00702 | Acriflavin resistance protein family signature | IPR001036 | Acriflavin resistance protein | 551 | 568 | 9.4E-104 |
| Gene3D | G3DSA:1.20.1640.10 | 8 | 511 | 0.0 | |||
| SUPERFAMILY | SSF82714 | IPR027463 | Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains | 719 | 805 | 3.79E-19 | |
| Pfam | PF00873 | AcrB/AcrD/AcrF family | IPR001036 | Acriflavin resistance protein | 1 | 1022 | 0.0 |
| Gene3D | G3DSA:3.30.2090.10 | IPR027463 | Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains | 178 | 274 | 0.0 | |
| PRINTS | PR00702 | Acriflavin resistance protein family signature | IPR001036 | Acriflavin resistance protein | 36 | 54 | 9.4E-104 |
| SUPERFAMILY | SSF82714 | IPR027463 | Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains | 181 | 270 | 3.01E-16 | |
| Gene3D | G3DSA:3.30.70.1430 | 38 | 814 | 0.0 | |||
| PRINTS | PR00702 | Acriflavin resistance protein family signature | IPR001036 | Acriflavin resistance protein | 618 | 632 | 9.4E-104 |
| PRINTS | PR00702 | Acriflavin resistance protein family signature | IPR001036 | Acriflavin resistance protein | 335 | 358 | 9.4E-104 |
| Gene3D | G3DSA:3.30.70.1320 | 132 | 331 | 0.0 | |||
| PRINTS | PR00702 | Acriflavin resistance protein family signature | IPR001036 | Acriflavin resistance protein | 444 | 467 | 9.4E-104 |
| PRINTS | PR00702 | Acriflavin resistance protein family signature | IPR001036 | Acriflavin resistance protein | 8 | 32 | 9.4E-104 |
| Gene3D | G3DSA:1.20.1640.10 | 512 | 1019 | 0.0 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.