Burkholderia cenocepacia J2315, BCAL1118

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:1.10.443.10
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006310 DNA recombination
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:1.10.443.10
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0015074 DNA integration
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:1.10.443.10
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF13356 Arm DNA-binding domain IPR025166 Integrase, DNA-binding domain 3 88 2.8E-19
Gene3D G3DSA:1.10.150.130 IPR010998 Integrase/recombinase, N-terminal 99 205 3.1E-26
SUPERFAMILY SSF56349 IPR011010 DNA breaking-rejoining enzyme, catalytic core 99 382 4.71E-54
Gene3D G3DSA:1.10.443.10 IPR013762 Integrase-like, catalytic domain superfamily 209 393 9.3E-14
CDD cd00801 INT_P4_C 209 388 2.51324E-61
Pfam PF00589 Phage integrase family IPR002104 Integrase, catalytic domain 210 369 3.9E-13
Gene3D G3DSA:3.30.160.390 IPR038488 Integrase, DNA-binding domain superfamily 1 98 5.2E-40

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.