Burkholderia cenocepacia J2315, BCAL0469 (rsmB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006364 rRNA processing
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00563
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008168 methyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS51686
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003723 RNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS01153
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008649 rRNA methyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00563
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF48013 IPR035926 NusB-like superfamily 34 179 3.05E-16
PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature IPR023267 RNA (C5-cytosine) methyltransferase 250 264 6.8E-27
PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature IPR023267 RNA (C5-cytosine) methyltransferase 344 356 6.8E-27
PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature IPR023267 RNA (C5-cytosine) methyltransferase 394 410 6.8E-27
PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature IPR023267 RNA (C5-cytosine) methyltransferase 279 289 6.8E-27
PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature IPR023267 RNA (C5-cytosine) methyltransferase 445 462 6.8E-27
SUPERFAMILY SSF53335 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase 170 463 5.52E-63
Gene3D G3DSA:1.10.940.10 IPR035926 NusB-like superfamily 32 173 1.9E-14
CDD cd02440 AdoMet_MTases 277 400 2.72187E-6
Gene3D G3DSA:3.30.70.1170 203 258 2.4E-15
ProSitePatterns PS01153 NOL1/NOP2/sun family signature. IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site 343 354 -
Gene3D G3DSA:3.40.50.150 259 463 1.4E-56
ProSiteProfiles PS51686 SAM-dependent MTase RsmB/NOP-type domain profile. IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type 194 463 51.871
Pfam PF01189 16S rRNA methyltransferase RsmB/F IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type 269 461 2.9E-51
TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase IPR004573 rRNA small subunit methyltransferase B 35 463 2.7E-87

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.