Burkholderia cenocepacia J2315, BCAL0452

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0015276 ligand-gated ion channel activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00079
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00079
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG bcj02010 ABC transporters 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.40.190.10 118 217 2.9E-72
Gene3D G3DSA:3.40.190.10 34 248 2.9E-72
CDD cd13711 PBP2_Ngo0372_TcyA 34 257 7.86513E-132
SUPERFAMILY SSF53850 6 256 2.44E-72
SMART SM00079 IPR001320 Ionotropic glutamate receptor 35 255 0.0036
SMART SM00062 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF 35 256 2.8E-71
Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF 37 254 1.3E-64
ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. IPR018313 Solute-binding protein family 3, conserved site 58 71 -

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.