Burkholderia cenocepacia J2315, BCAL0339 (tssJ)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0033103 | protein secretion by the type VI secretion system | Non-traceable Author Statement | ECO:0000303 non-traceable author statement used in manual assertion |
18316384 | Reviewed by curator |
Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG | bcj03070 | Bacterial secretion system | 73.0+/03-31, Mar 15 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 17 | 5.0 | ||
| TIGRFAM | TIGR03352 | VI_chp_3: type VI secretion lipoprotein, VC_A0113 family | IPR017734 | Type VI secretion system, lipoprotein SciN | 3 | 171 | 2.8E-41 |
| Pfam | PF12790 | Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 | IPR017734 | Type VI secretion system, lipoprotein SciN | 50 | 169 | 3.2E-31 |
| Gene3D | G3DSA:2.60.40.4150 | IPR038706 | Type VI secretion protein SciN-like superfamily | 47 | 177 | 5.7E-35 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.