Burkholderia cenocepacia J2315, BCAL0223 (rplA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006412 translation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01169
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003723 RNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01169
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0015934 large ribosomal subunit
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01169
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003735 structural constituent of ribosome
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01169
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG bcj03010 Ribosome 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.40.50.790 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich 68 159 4.2E-79
Pfam PF00687 Ribosomal protein L1p/L10e family IPR028364 Ribosomal protein L1/ribosomal biogenesis protein 31 220 9.9E-52
ProSitePatterns PS01199 Ribosomal protein L1 signature. IPR023673 Ribosomal protein L1, conserved site 121 139 -
Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. IPR005878 Ribosomal protein L1, bacterial-type 2 229 43.266
PIRSF PIRSF002155 IPR002143 Ribosomal protein L1 1 227 1.7E-79
Gene3D G3DSA:3.30.190.20 25 222 4.2E-79
CDD cd00403 Ribosomal_L1 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein 23 224 1.39133E-74
TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 IPR005878 Ribosomal protein L1, bacterial-type 3 228 3.4E-105
SUPERFAMILY SSF56808 IPR023674 Ribosomal protein L1-like 6 225 1.96E-80

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.