Burkholderia cenocepacia J2315, BCAL0075 (gcvT)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006546 glycine catabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00259
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005515 protein binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.30.1360.120
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004047 aminomethyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00259
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG bcj01200 Carbon metabolism 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bcj00670 One carbon pool by folate 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG (InterPro) 00260 Glycine, serine and threonine metabolism InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG (InterPro) 00670 One carbon pool by folate InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG bcj01100 Metabolic pathways 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bcj00260 Glycine, serine and threonine metabolism 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.30.1360.120 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 8 239 5.5E-78
Gene3D G3DSA:4.10.1250.10 240 282 3.1E-20
Pfam PF01571 Aminomethyltransferase folate-binding domain IPR006222 Aminomethyltransferase, folate-binding domain 9 262 1.3E-84
Gene3D G3DSA:2.40.30.110 283 372 4.2E-26
Gene3D G3DSA:3.30.70.1400 53 142 5.5E-78
TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein IPR006223 Glycine cleavage system T protein 5 366 1.0E-116
PIRSF PIRSF006487 IPR028896 Aminomethyltransferase-like 1 371 1.4E-79
SUPERFAMILY SSF103025 4 279 2.51E-86
SUPERFAMILY SSF101790 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal 278 368 7.19E-21
Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain IPR013977 Glycine cleavage T-protein, C-terminal barrel domain 287 364 1.1E-13
Hamap MF_00259 Aminomethyltransferase [gcvT]. IPR022903 Glycine cleavage system T protein, bacteria 3 366 42.843

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.