Burkholderia cenocepacia J2315, BCAL0066

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00342
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003700 DNA-binding transcription factor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00342
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF46689
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0043565 sequence-specific DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00342
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
MobiDBLite mobidb-lite consensus disorder prediction 1 21 -
MobiDBLite mobidb-lite consensus disorder prediction 1 22 -
Gene3D G3DSA:1.10.10.60 235 338 6.7E-34
SMART SM00342 IPR018060 DNA binding HTH domain, AraC-type 250 334 4.1E-23
SUPERFAMILY SSF46689 IPR009057 Homeobox-like domain superfamily 234 284 6.48E-8
Pfam PF12833 Helix-turn-helix domain IPR018060 DNA binding HTH domain, AraC-type 256 335 5.8E-28
SUPERFAMILY SSF46689 IPR009057 Homeobox-like domain superfamily 286 335 4.84E-5
ProSiteProfiles PS01124 Bacterial regulatory proteins, araC family DNA-binding domain profile. IPR018060 DNA binding HTH domain, AraC-type 237 336 24.145

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.