Burkholderia cenocepacia J2315, BCAL0054

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0046872 metal ion binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd04784
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00422
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd04784
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003700 DNA-binding transcription factor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd04784
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0045893 positive regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd04784
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd04784 HTH_CadR-PbrR IPR011791 Cd(II)/Pb(II)-responsive transcriptional regulator 1 127 1.79642E-63
ProSiteProfiles PS50937 MerR-type HTH domain profile. IPR000551 MerR-type HTH domain 1 69 36.952
SUPERFAMILY SSF46955 IPR009061 Putative DNA-binding domain superfamily 1 126 9.89E-34
Coils Coil 91 111 -
PRINTS PR00040 MerR bacterial regulatory protein HTH signature IPR000551 MerR-type HTH domain 2 13 1.7E-9
Gene3D G3DSA:1.10.1660.10 1 125 1.7E-34
SMART SM00422 IPR000551 MerR-type HTH domain 1 70 1.4E-28
Pfam PF00376 MerR family regulatory protein IPR000551 MerR-type HTH domain 2 39 5.6E-15
PRINTS PR00040 MerR bacterial regulatory protein HTH signature IPR000551 MerR-type HTH domain 13 26 1.7E-9
Pfam PF09278 MerR, DNA binding IPR015358 Transcription regulator MerR, DNA binding 44 108 3.7E-19
TIGRFAM TIGR02047 CadR-PbrR: Cd(II)/Pb(II)-responsive transcriptional regulator IPR011791 Cd(II)/Pb(II)-responsive transcriptional regulator 1 126 2.5E-53
ProSitePatterns PS00552 MerR-type HTH domain signature. IPR000551 MerR-type HTH domain 4 26 -
PRINTS PR00040 MerR bacterial regulatory protein HTH signature IPR000551 MerR-type HTH domain 37 57 1.7E-9

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.