Burkholderia cenocepacia J2315, BCAL0042 (putA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0055114 oxidation-reduction process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.40.605.10
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003842 1-pyrroline-5-carboxylate dehydrogenase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01238
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003700 DNA-binding transcription factor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF000197
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:1.10.1220.10
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016491 oxidoreductase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.40.605.10
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006561 proline biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01238
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0010133 proline catabolic process to glutamate
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF000197
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004657 proline dehydrogenase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF000197
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.40.309.10
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG (InterPro) 00250 Alanine, aspartate and glutamate metabolism InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG bcj00330 Arginine and proline metabolism 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bcj01130 Biosynthesis of antibiotics 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
MetaCyc (5<i>R</i>)-carbapenem carboxylate biosynthesis InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc ethylene biosynthesis II (microbes) InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG (InterPro) 00330 Arginine and proline metabolism InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG bcj01110 Biosynthesis of secondary metabolites 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bcj00250 Alanine, aspartate and glutamate metabolism 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bcj01100 Metabolic pathways 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd07125 ALDH_PutA-P5CDH 556 1108 0.0
Pfam PF00171 Aldehyde dehydrogenase family IPR015590 Aldehyde dehydrogenase domain 652 1097 5.7E-113
Gene3D G3DSA:1.10.1220.10 IPR013321 Arc-type ribbon-helix-helix 11 52 5.1E-18
SUPERFAMILY SSF81935 IPR024089 Proline dehydrogenase PutA, domain I/II 89 258 1.1E-64
SUPERFAMILY SSF53720 IPR016161 Aldehyde/histidinol dehydrogenase 1145 1293 7.2E-5
Pfam PF18327 Proline utilization A proline dehydrogenase N-terminal domain IPR041349 Proline utilization A proline dehydrogenase N-terminal domain 90 137 3.9E-20
ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. IPR016160 Aldehyde dehydrogenase, cysteine active site 901 912 -
Pfam PF14850 DNA-binding domain of Proline dehydrogenase IPR024082 Proline dehydrogenase PutA, domain II 145 256 2.9E-46
Gene3D G3DSA:3.40.605.10 IPR016162 Aldehyde dehydrogenase, N-terminal 629 1099 3.9E-145
SUPERFAMILY SSF53720 IPR016161 Aldehyde/histidinol dehydrogenase 643 1099 8.25E-127
SUPERFAMILY SSF47598 IPR010985 Ribbon-helix-helix 4 45 8.45E-9
TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 600 1099 3.8E-242
Gene3D G3DSA:3.20.20.220 89 185 4.0E-18
Gene3D G3DSA:3.40.309.10 IPR016163 Aldehyde dehydrogenase, C-terminal 876 1068 3.9E-145
PIRSF PIRSF000197 IPR025703 Bifunctional protein PutA 75 1310 0.0
Pfam PF01619 Proline dehydrogenase IPR002872 Proline dehydrogenase domain 267 563 4.5E-99
SUPERFAMILY SSF51730 IPR029041 FAD-linked oxidoreductase-like 259 608 5.49E-121
Gene3D G3DSA:3.20.20.220 218 600 1.6E-152

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.