Burkholderia cenocepacia J2315, BCAL0041 (priA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0032508 DNA duplex unwinding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00595
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003678 DNA helicase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00595
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003676 nucleic acid binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00270
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00595
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00270
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006260 DNA replication
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00595
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG bcj03440 Homologous recombination 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.40.50.300 201 397 7.1E-67
TIGRFAM TIGR00595 priA: primosomal protein N' IPR005259 Primosomal protein N' 232 751 3.5E-166
Coils Coil 432 452 -
SMART SM00487 IPR014001 Helicase superfamily 1/2, ATP-binding domain 207 411 8.5E-14
Pfam PF18074 Primosomal protein N C-terminal domain IPR041236 Primosomal protein N, C-terminal domain 656 750 1.2E-17
Pfam PF00271 Helicase conserved C-terminal domain IPR001650 Helicase, C-terminal 528 613 3.1E-7
ProSiteProfiles PS51192 Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. IPR014001 Helicase superfamily 1/2, ATP-binding domain 222 395 16.243
Pfam PF17764 3??? DNA-binding domain (3???BD) IPR041222 Primosomal protein N', 3' DNA-binding domain 7 102 4.1E-21
Gene3D G3DSA:1.10.8.630 IPR042115 Primosomal protein N', 3' DNA-binding domain superfamily 5 111 2.0E-24
Pfam PF18319 PriA DNA helicase Cys-rich region (CRR) domain IPR040498 PriA DNA helicase, Cys-rich region (CRR) domain 469 494 6.3E-9
Hamap MF_00983 Probable primosomal protein N' [priA]. IPR005259 Primosomal protein N' 8 753 22.613
CDD cd17929 DEXHc_priA 215 398 1.1927E-76
SMART SM00490 IPR001650 Helicase, C-terminal 516 613 4.2E-10
CDD cd18804 SF2_C_priA 408 650 7.77931E-112
ProSiteProfiles PS51194 Superfamilies 1 and 2 helicase C-terminal domain profile. IPR001650 Helicase, C-terminal 495 647 8.363
SUPERFAMILY SSF52540 IPR027417 P-loop containing nucleoside triphosphate hydrolase 226 623 3.63E-38
Pfam PF00270 DEAD/DEAH box helicase IPR011545 DEAD/DEAH box helicase domain 212 378 4.8E-12

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.