Burkholderia cenocepacia J2315, BCAL0024 (gidA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0050660 flavin adenine dinucleotide binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01134
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0008033 tRNA processing
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01134
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016491 oxidoreductase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF51905
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0002098 tRNA wobble uridine modification
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00136
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055114 oxidation-reduction process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF51905
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SMART SM01228 556 627 2.4E-42
ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. IPR020595 MnmG-related, conserved site 369 392 -
Pfam PF01134 Glucose inhibited division protein A IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related 8 400 4.2E-166
TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG 7 631 5.6E-275
MobiDBLite mobidb-lite consensus disorder prediction 637 656 -
ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. IPR020595 MnmG-related, conserved site 274 288 -
Pfam PF13932 GidA associated domain IPR026904 GidA associated domain 3 403 626 1.5E-75
SUPERFAMILY SSF51905 IPR023753 FAD/NAD(P)-binding domain 97 262 2.75E-48
Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG 5 634 42.82
Gene3D G3DSA:3.50.50.60 IPR023753 FAD/NAD(P)-binding domain 5 264 4.2E-76
SUPERFAMILY SSF51905 IPR023753 FAD/NAD(P)-binding domain 6 66 2.75E-48

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.