Burkholderia cenocepacia J2315, BCAL0013

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0003700	DNA-binding transcription factor activity	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00126	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0006355	regulation of transcription, DNA-templated	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00126	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
ProSiteProfiles	PS50931	LysR-type HTH domain profile.	IPR000847	Transcription regulator HTH, LysR	1	58	33.814
Gene3D	G3DSA:1.10.10.10		IPR036388	Winged helix-like DNA-binding domain superfamily	1	84	1.0E-25
SUPERFAMILY	SSF46785		IPR036390	Winged helix DNA-binding domain superfamily	1	87	4.54E-23
PRINTS	PR00039	LysR bacterial regulatory protein HTH signature	IPR000847	Transcription regulator HTH, LysR	18	29	8.8E-11
Pfam	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family	IPR000847	Transcription regulator HTH, LysR	4	62	2.9E-20
PRINTS	PR00039	LysR bacterial regulatory protein HTH signature	IPR000847	Transcription regulator HTH, LysR	39	50	8.8E-11
Pfam	PF03466	LysR substrate binding domain	IPR005119	LysR, substrate-binding	87	297	1.6E-26
Coils	Coil				68	88	-
CDD	cd05466	PBP2_LTTR_substrate			92	293	5.96884E-24
PRINTS	PR00039	LysR bacterial regulatory protein HTH signature	IPR000847	Transcription regulator HTH, LysR	29	39	8.8E-11
Gene3D	G3DSA:3.40.190.290				90	298	7.2E-25
SUPERFAMILY	SSF53850				88	297	4.56E-27

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.