Burkholderia pseudomallei 1710b, BURPS1710b_0222 (gspF)

Gene Feature Overview

Strain	Burkholderia pseudomallei 1710b GCF_000012785.1|latest
Locus Tag	BURPS1710b_0222
NCBI Locus Tag	BURPS1710B_RS01040
Name	gspF
Replicon	chromosome I
Genomic location	234943 - 236160 (+ strand)

Cross-References

RefSeq	WP_004196821.1
GI	76810282
Entrez	3688472
GI	76810282
INSDC	ABA49210.1
NCBI Locus Tag	BURPS1710B_RS01040
NCBI Old Locus Tag	BURPS1710b_0222
RefSeq	WP_004196821.1
UniParc	UPI000043AA62
UniProtKB Acc	Q3JXR5
UniProtKB ID	Q3JXR5_BURP1
UniRef100	UniRef100_A0A069AW87
UniRef50	UniRef50_D5CMQ1
UniRef90	UniRef90_Q2T2F5

Product

Feature Type	CDS
Coding Frame	1
Product Name	general secretion pathway protein F
Synonyms
Evidence for Translation
Charge (pH 7)	10.21
Kyte-Doolittle Hydrophobicity Value	0.341
Molecular Weight (kDa)	44101.2
Isoelectric Point (pI)	10.46

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 406 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group	BG000047 (650 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: BURPS1710b_0222 Search term: gspF Search term: general secretion pathway protein F

Human Homologs

References

Molecular characterization of genetic loci required for secretion of exoproducts in Burkholderia pseudomallei. DeShazer D, Brett PJ, Burtnick MN, Woods DE J Bacteriol 1999 Aug;181(15):4661-4 PubMed ID: 10419967