Burkholderia dolosa AU0158, AK34_RS08380 (rpfR)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Upstream Motifs
*Up to 500bp upstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: GCATCGCGCG-N75-CGCGCGATGC | 1925811 | 1925905 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: GCATCGCGCG-N75-CGCGCGATGC | 1925811 | 1925905 | - |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
Motifs annotated in this feature
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Rho-independent transcription terminator TERM 440 | 1923726 | 1923759 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |
| Inverted repeat: GAAAGCTCAGGC-N5-GCCTGAGCTTTC | 1923728 | 1923756 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: GAAAGCTCAGGC-N5-GCCTGAGCTTTC | 1923728 | 1923756 | - |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
Downstream motifs
*Up to 500bp downstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Rho-independent transcription terminator TERM 440 | 1923726 | 1923759 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |
| Inverted repeat: GAAAGCTCAGGC-N5-GCCTGAGCTTTC | 1923728 | 1923756 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: GAAAGCTCAGGC-N5-GCCTGAGCTTTC | 1923728 | 1923756 | - |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |