Burkholderia vietnamiensis G4, Bcep1808_4460 (truA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003723 RNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00071
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0009982 pseudouridine synthase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00071
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0001522 pseudouridine synthesis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00071
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009451 RNA modification
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00071
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF01416 tRNA pseudouridine synthase IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain 142 244 2.4E-31
CDD cd02570 PseudoU_synth_EcTruA 5 243 2.9133E-135
Pfam PF01416 tRNA pseudouridine synthase IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain 8 102 2.3E-6
SUPERFAMILY SSF55120 IPR020103 Pseudouridine synthase, catalytic domain superfamily 1 252 6.76E-89
Gene3D G3DSA:3.30.70.660 IPR020095 Pseudouridine synthase I, TruA, C-terminal 105 242 1.3E-47
PIRSF PIRSF001430 IPR001406 Pseudouridine synthase I, TruA 1 254 2.0E-78
Hamap MF_00171 tRNA pseudouridine synthase A [truA]. IPR001406 Pseudouridine synthase I, TruA 1 243 34.229
Gene3D G3DSA:3.30.70.580 1 104 9.4E-35
TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase IPR001406 Pseudouridine synthase I, TruA 2 238 5.6E-61

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.