Burkholderia vietnamiensis G4, Bcep1808_5776
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0015288 | porin activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF13609
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Cellular Component | GO:0016020 | membrane |
Inferred from Sequence Model
Term mapped from: InterPro:PF13609
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56935 | 29 | 345 | 1.74E-65 | |||
| Pfam | PF13609 | Gram-negative porin | IPR033900 | Porin domain, Gram-negative type | 20 | 326 | 1.5E-47 |
| Gene3D | G3DSA:2.40.160.10 | IPR023614 | Porin domain superfamily | 19 | 345 | 1.7E-68 | |
| CDD | cd00342 | gram_neg_porins | IPR033900 | Porin domain, Gram-negative type | 30 | 345 | 3.69916E-61 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.