Burkholderia thailandensis E264 ATCC 700388, BTH_I2958 (clpV-1)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0033103	protein secretion by the type VI secretion system	IGC Inferred from Genomic Context	ECO:0000177 genomic context evidence
Biological Process	GO:0033103	protein secretion by the type VI secretion system	TAS Traceable Author Statement	ECO:0000304 traceable author statement used in manual assertion	20865170	Reviewed by curator
Molecular Function	GO:0005524	ATP binding	ISM Inferred from Sequence Model Term mapped from: InterPro:PS00870	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0019538	protein metabolic process	ISM Inferred from Sequence Model Term mapped from: InterPro:SSF81923	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	bte03070	Bacterial secretion system	73.0+/03-31, Mar 15	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
CDD	cd00009	AAA			208	363	4.11682E-16
Pfam	PF00004	ATPase family associated with various cellular activities (AAA)	IPR003959	ATPase, AAA-type, core	230	342	8.8E-10
Pfam	PF17871	AAA lid domain	IPR041546	ClpA/ClpB, AAA lid domain	372	470	4.7E-29
Gene3D	G3DSA:3.40.50.300				176	369	3.4E-63
SUPERFAMILY	SSF52540		IPR027417	P-loop containing nucleoside triphosphate hydrolase	186	513	1.03E-69
TIGRFAM	TIGR03345	VI_ClpV1: type VI secretion ATPase, ClpV1 family	IPR017729	Type VI secretion system, ATPase ClpV1	12	874	0.0
SMART	SM01086		IPR019489	Clp ATPase, C-terminal	791	884	3.2E-8
Gene3D	G3DSA:1.10.8.60				791	885	1.7E-10
Pfam	PF10431	C-terminal, D2-small domain, of ClpB protein	IPR019489	Clp ATPase, C-terminal	792	866	4.1E-11
PRINTS	PR00300	ATP-dependent Clp protease ATP-binding subunit signature	IPR001270	ClpA/B family	728	742	2.0E-34
SMART	SM00382		IPR003593	AAA+ ATPase domain	225	370	3.4E-9
Gene3D	G3DSA:3.40.50.300				372	564	2.8E-44
SUPERFAMILY	SSF52540		IPR027417	P-loop containing nucleoside triphosphate hydrolase	566	865	1.19E-64
PRINTS	PR00300	ATP-dependent Clp protease ATP-binding subunit signature	IPR001270	ClpA/B family	695	713	2.0E-34
Coils	Coil				439	459	-
PRINTS	PR00300	ATP-dependent Clp protease ATP-binding subunit signature	IPR001270	ClpA/B family	621	639	2.0E-34
Pfam	PF07724	AAA domain (Cdc48 subfamily)	IPR003959	ATPase, AAA-type, core	617	786	1.6E-42
Gene3D	G3DSA:1.10.1780.10		IPR036628	Clp, N-terminal domain superfamily	1	160	1.0E-47
SUPERFAMILY	SSF81923		IPR036628	Clp, N-terminal domain superfamily	11	128	2.35E-19
Gene3D	G3DSA:3.40.50.300				570	789	3.1E-69
Coils	Coil				470	494	-
CDD	cd00009	AAA			591	743	3.7742E-16
PRINTS	PR00300	ATP-dependent Clp protease ATP-binding subunit signature	IPR001270	ClpA/B family	666	684	2.0E-34
ProSitePatterns	PS00870	Chaperonins clpA/B signature 1.	IPR018368	ClpA/B, conserved site 1	321	333	-
Pfam	PF02861	Clp amino terminal domain, pathogenicity island component	IPR004176	Clp, N-terminal	29	74	8.9E-11
SMART	SM00382		IPR003593	AAA+ ATPase domain	617	759	2.8E-11

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.