Burkholderia glumae ATCC 33617, KS03_RS21965 (tepR)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0043565 sequence-specific DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02954
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008134 transcription factor binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS50045
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS50045
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF46689
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS50045
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00448
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF46689 IPR009057 Homeobox-like domain superfamily 372 465 2.3E-12
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 5 115 1.7E-22
Pfam PF00158 Sigma-54 interaction domain IPR002078 RNA polymerase sigma factor 54 interaction domain 145 320 2.5E-45
Pfam PF02954 Bacterial regulatory protein, Fis family IPR002197 DNA binding HTH domain, Fis-type 423 462 1.1E-10
ProSiteProfiles PS50045 Sigma-54 interaction domain profile. IPR002078 RNA polymerase sigma factor 54 interaction domain 145 388 46.738
Gene3D G3DSA:1.10.8.60 325 395 1.2E-11
PRINTS PR01590 FIS bacterial regulatory protein HTH signature IPR002197 DNA binding HTH domain, Fis-type 446 466 1.2E-6
Gene3D G3DSA:3.40.50.300 139 324 3.7E-49
Coils Coil 457 466 -
SUPERFAMILY SSF52172 IPR011006 CheY-like superfamily 1 190 3.84E-40
Gene3D G3DSA:1.10.10.60 421 462 1.2E-10
ProSiteProfiles PS50110 Response regulatory domain profile. IPR001789 Signal transduction response regulator, receiver domain 3 120 38.171
SMART SM00448 IPR001789 Signal transduction response regulator, receiver domain 2 116 5.6E-32
SUPERFAMILY SSF52540 IPR027417 P-loop containing nucleoside triphosphate hydrolase 145 390 2.11E-49
SMART SM00382 IPR003593 AAA+ ATPase domain 165 317 1.8E-7
PRINTS PR01590 FIS bacterial regulatory protein HTH signature IPR002197 DNA binding HTH domain, Fis-type 429 446 1.2E-6
Gene3D G3DSA:3.40.50.2300 2 138 3.6E-29
CDD cd00156 REC IPR001789 Signal transduction response regulator, receiver domain 5 119 1.17951E-24
CDD cd00009 AAA 146 303 2.0564E-11

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.