Burkholderia pseudomallei K96243, BPSS1865 (trpS)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0000166 nucleotide binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR01039
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004812 aminoacyl-tRNA ligase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00579
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006418 tRNA aminoacylation for protein translation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00579
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006436 tryptophanyl-tRNA aminoacylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR01039
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR01039
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004830 tryptophan-tRNA ligase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR01039
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG bps00970 Aminoacyl-tRNA biosynthesis 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG (InterPro) 00970 Aminoacyl-tRNA biosynthesis InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF52374 13 337 2.02E-77
PRINTS PR01039 Tryptophanyl-tRNA synthetase signature IPR002306 Tryptophan-tRNA ligase 75 94 2.2E-22
PRINTS PR01039 Tryptophanyl-tRNA synthetase signature IPR002306 Tryptophan-tRNA ligase 153 174 2.2E-22
CDD cd00806 TrpRS_core IPR002306 Tryptophan-tRNA ligase 15 292 5.2193E-102
TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase IPR002306 Tryptophan-tRNA ligase 13 337 4.1E-70
Gene3D G3DSA:3.40.50.620 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold 15 333 2.5E-102
PRINTS PR01039 Tryptophanyl-tRNA synthetase signature IPR002306 Tryptophan-tRNA ligase 205 215 2.2E-22
ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site 20 29 -
Pfam PF00579 tRNA synthetases class I (W and Y) IPR002305 Aminoacyl-tRNA synthetase, class Ic 10 292 1.2E-54
Gene3D G3DSA:1.10.240.10 192 306 2.5E-102
PRINTS PR01039 Tryptophanyl-tRNA synthetase signature IPR002306 Tryptophan-tRNA ligase 24 40 2.2E-22

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.