Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Molecular Function | GO:0003700 | DNA-binding transcription factor activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF00126
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0006355 | regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:PF00126
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
CDD | cd08417 | PBP2_Nitroaromatics_like | IPR037402 | HTH-type transcriptional regulator YidZ, PBP2 domain | 99 | 297 | 5.76468E-54 |
Gene3D | G3DSA:1.10.10.10 | IPR036388 | Winged helix-like DNA-binding domain superfamily | 2 | 89 | 6.6E-28 | |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 35 | 45 | 1.4E-8 |
Gene3D | G3DSA:3.40.190.10 | 172 | 269 | 1.8E-50 | |||
ProSiteProfiles | PS50931 | LysR-type HTH domain profile. | IPR000847 | Transcription regulator HTH, LysR | 7 | 64 | 27.876 |
Pfam | PF03466 | LysR substrate binding domain | IPR005119 | LysR, substrate-binding | 99 | 297 | 1.9E-20 |
SUPERFAMILY | SSF46785 | IPR036390 | Winged helix DNA-binding domain superfamily | 6 | 86 | 1.98E-19 | |
Gene3D | G3DSA:3.40.190.10 | 93 | 293 | 1.8E-50 | |||
Pfam | PF00126 | Bacterial regulatory helix-turn-helix protein, lysR family | IPR000847 | Transcription regulator HTH, LysR | 9 | 66 | 8.1E-19 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 24 | 35 | 1.4E-8 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 45 | 56 | 1.4E-8 |
SUPERFAMILY | SSF53850 | 91 | 297 | 1.43E-35 |