Burkholderia pseudomallei K96243, BPSS1721

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003700 DNA-binding transcription factor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00392
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00866
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00392
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd07377 WHTH_GntR IPR000524 Transcription regulator HTH, GntR 34 99 9.11991E-25
SMART SM00866 IPR011663 UbiC transcription regulator-associated 118 260 4.5E-32
MobiDBLite mobidb-lite consensus disorder prediction 1 19 -
SUPERFAMILY SSF46785 IPR036390 Winged helix DNA-binding domain superfamily 33 112 4.93E-22
Gene3D G3DSA:3.40.1410.10 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily 106 265 7.4E-53
Gene3D G3DSA:1.10.10.10 IPR036388 Winged helix-like DNA-binding domain superfamily 31 99 6.1E-24
Pfam PF00392 Bacterial regulatory proteins, gntR family IPR000524 Transcription regulator HTH, GntR 35 98 6.8E-21
SMART SM00345 IPR000524 Transcription regulator HTH, GntR 39 98 3.0E-20
PRINTS PR00035 GntR bacterial regulatory protein HTH signature IPR000524 Transcription regulator HTH, GntR 72 88 1.6E-5
Pfam PF07702 UTRA domain IPR011663 UbiC transcription regulator-associated 123 256 6.0E-33
SUPERFAMILY SSF64288 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily 87 265 1.0E-39
MobiDBLite mobidb-lite consensus disorder prediction 1 28 -
PRINTS PR00035 GntR bacterial regulatory protein HTH signature IPR000524 Transcription regulator HTH, GntR 58 72 1.6E-5
ProSiteProfiles PS50949 GntR-type HTH domain profile. IPR000524 Transcription regulator HTH, GntR 33 101 22.296

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.